rs1971298 chr17:64082248 C>T
- Sequence
gcagcaaacaaacaactcactaaa[C/T]caaaaacactctaggaaacaggaa
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) CTV-1 (Adult T acute lymphoblastic leukemia) HEK293T (embryonic kidney)
- ASB for transcription factors
- ZN785_HUMAN MEIS2_HUMAN PKNX1_HUMAN ZBT21_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN785_HUMAN | 3.32 | n/a | 1.00 | n/a | n/a | |||
| MEIS2_HUMAN | n/a | 0.84 | 2.00 | 4.17 | Concordant | |||
| PKNX1_HUMAN | n/a | 1.51 | 2.00 | n/a | No Hit | |||
| ZBT21_HUMAN | 2.65 | n/a | 1.00 | n/a | n/a |
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Motif analysis
