rs197354 chr7:36390460 A>G
- Sequence
agtgcggctgccgccgggaaaggc[A/G]gtaggatgtgtgatttgcggagtt
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- TYY1_HUMAN NELFA_HUMAN CDN1B_HUMAN RFOX2_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | n/a | 3.27 | 1.00 | n/a | No Hit | |||
| NELFA_HUMAN | 2.40 | n/a | 2.00 | n/a | n/a | |||
| CDN1B_HUMAN | 0.59 | 1.36 | 2.00 | n/a | n/a | |||
| RFOX2_HUMAN | 2.05 | -0.81 | 2.00 | n/a | n/a | |||
| NRF1_HUMAN | 0.74 | 1.32 | 2.00 | n/a | No Hit |
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