rs199562 chr20:19960894 A>T

Sequence
gtggaaatggaaggagctctggtt[A/T]tgagatgggcagatatgggcctga
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
RBM25_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RBM25_HUMAN 2.34 -1.40 1.6·10-51.00 1.00 n/a n/a
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  hdl cholesterol,  obesity with early age of onset (age >2),  urinary albumin-to-creatinine ratio

Download