ADASTRA v6.1.0
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rs201455
chr7:102096932
C
>
T
Sequence
ttctcaggcatcaggtgtcacttc[C/T]agcctcataatcactggaccctta
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
RFX1_HUMAN
ESR1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RFX1_HUMAN
2.83
-2.82
2.5·10
-3
1.00
1.00
n/a
No Hit
ESR1_HUMAN
2.33
0.41
2.8·10
-3
1.00
1.21
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
chronic kidney disease
,
height
,
microalbuminuria
,
serum creatinine
GTEx eQTL
Brain_Caudate_basal_ganglia
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)