ADASTRA v6.1.0
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rs204236
chr6:13733333
C
>
T
Sequence
gtgctgccaaaacaacatgtgagc[C/T]ggcgaagatgatcctgaacttgag
ASB in cell types
22RV1 (prostate carcinoma)
breast tumor
ASB for transcription factors
ANDR_HUMAN
ESR1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN
2.56
0.41
2.8·10
-3
1.00
1.56
n/a
No Hit
ESR1_HUMAN
2.67
n/a
0.01
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
alzheimers disease
,
comorbid depressive syndrome and alcohol dependence
,
hypertension (early onset hypertension)
,
rheumatoid arthritis
,
urinary albumin-to-creatinine ratio
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Colon_Sigmoid
,
Muscle_Skeletal
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)