ADASTRA v6.1.0
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rs205763
chr7:130910288
A
>
G
Sequence
ttactacttaaaggccattagcaa[A/G]aaatcctccagccttgtgtggaat
ASB in cell types
MSC (mesenchymal stem cells)
ASB for transcription factors
CHD1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CHD1_HUMAN
2.76
-2.50
0.04
1.00
1.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
ldl cholesterol
,
ldl cholesterol change with statins
,
microalbuminuria
,
total cholesterol change with statins
,
urinary albumin-to-creatinine ratio
GTEx eQTL
Cells_Cultured_fibroblasts
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)