rs205785 chr20:57792893 T>C

Sequence
gtgcacacctgctcctgcaattct[T/C]caagcggtgagcagctgagtgctc
ASB for transcription factors
PAX2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PAX2_HUMAN 1.85 n/a 7.8·10-31.00 3.00 -0.93 Weak Concordant
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Motif analysis

PAX2_HUMAN Weak Concordant
PAX2_HUMAN pic

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence total cholesterol

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