rs2089511 chr4:48174344 G>A

Sequence
gctccccaatgctgtcaatcccta[G/A]catgtctaatagccatcaaagctg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 2.38 -2.07 0.021.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  total cholesterol
GTEx eQTL Artery_Tibial,  Cells_Cultured_fibroblasts,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

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