rs2089909 chr11:1853036 C>T
- Sequence
cagccggaagggggaagtgaaact[C/T]ggctgggggtgggggctcagaagc
- ASB in cell types
- MDM(monocyte derived macrophages) THP-1 (acute monocytic leukemia) MOLT-4 (Adult T acute lymphoblastic leukemia) Kasumi-1 (acute myeloblastic leukemia)
- ASB for transcription factors
- SPI1_HUMAN MTG8_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.53 | 0.59 | 1.58 | n/a | No Hit | |||
| MTG8_HUMAN | 2.56 | -2.14 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Spinal_cord_cervical_c-1, Esophagus_Muscularis, Lung, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Whole_Blood