rs2092520 chr20:20084057 T>G

Sequence
gtgcttggttttgcatacctgaag[T/G]gaaagaaaaatctagttgacgccg
ASB in cell types
prostate gland ID00014 (lymphoblastoid cell, DiGeorge syndrome)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
prostate gland 1.67 -1.44 0.031.00 1.00
ID00014 (lymphoblastoid cell, DiGeorge syndrome) 0.97 -0.54 0.041.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration,  advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
GTEx eQTL Muscle_Skeletal,  Skin_Sun_Exposed_Lower_leg

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