rs2093145 chr20:23598646 T>C
- Sequence
tcaaaaatattaaggcttgaatac[T/C]tgattaaataggatatgaagtcac
- ASB in cell types
- MDM(monocyte derived macrophages)
- ASB for transcription factors
- SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 2.80 | -0.12 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP cystatin c in serum, fasting blood glucose, serum cystatin c estimated glomerular filtration rate (egfr)
GTEx eQTL Artery_Aorta, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Putamen_basal_ganglia, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Lung, Nerve_Tibial, Testis, Whole_Blood