rs2093283 chr20:56787775 G>A

Sequence
tattttggctcagccgttgttttg[G/A]caataagaatgattaaacagatag
ASB in cell types
MCF7 (Invasive ductal breast carcinoma) MDA-MB-231 (breast adenocarcinoma)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma) 0.88 0.37 0.011.00 3.23
MDA-MB-231 (breast adenocarcinoma) 2.30 1.13 0.030.92 3.00
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Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence,  total cholesterol
GTEx eQTL Adrenal_Gland,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Muscularis

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