rs2094871 chr21:39088933 G>A

Sequence
ggcgggccctaaatccaatgactc[G/A]tgtcctcataggagacagaaaagg
ASB in cell types
HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
JUN_HUMAN JUND_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
JUN_HUMAN n/a 4.11 1.001.2·10-17 1.33 5.15 Concordant
JUND_HUMAN -4.39 3.10 1.008.2·10-6 1.33 5.49 Concordant
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Motif analysis

JUN_HUMAN Concordant
JUN_HUMAN pic

Genetic associations

GRASP 2 hour glucose,  childhood acute lymphoblastic leukemia,  fasting insulin,  homa-b,  homa-ir,  ldl cholesterol,  obesity with early age of onset (age >2),  ulcerative colitis
GTEx eQTL Artery_Aorta,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

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