rs2096018 chr1:67513990 G>C
- Sequence
gtttataaagacaatacatgtacc[G/C]ctgaacatagacccttatcagtag
- ASB in cell types
- HepG2 (hepatoblastoma) ESO-26 (Gastroesophageal junction adenocarcinoma)
- ASB for transcription factors
- TFE3_HUMAN GATA6_HUMAN P66A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TFE3_HUMAN | 2.82 | -2.71 | 1.00 | n/a | No Hit | |||
| GATA6_HUMAN | 2.00 | -3.39 | 1.33 | n/a | No Hit | |||
| P66A_HUMAN | 2.54 | -2.26 | 1.00 | n/a | n/a |
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