rs2098116 chr7:69620378 C>T

Sequence
agggaattgggcactgatgaatac[C/T]gtcagatggacccctgaatagagg
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
ZEB2_HUMAN ZN366_HUMAN ZXDB_HUMAN ZN394_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZEB2_HUMAN -2.60 2.70 1.000.01 1.00 n/a No Hit
ZN366_HUMAN -1.86 2.21 1.000.02 1.00 n/a n/a
ZXDB_HUMAN -2.41 2.65 1.000.02 1.00 n/a n/a
ZN394_HUMAN -2.02 2.46 1.000.03 1.00 n/a No Hit
IKZF1_HUMAN 1.68 -1.22 0.041.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol
GTEx eQTL Whole_Blood

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