rs2098497 chr17:19111518 G>C
- Sequence
gaacatcttagttccaagttttgg[G/C]aattatggataaagctgctatata
- ASB in cell types
- GM18526 (B – cells Lymphoblastoid Cell Lines) LNCaP C4-2B (prostate carcinoma) RWPE2
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.37 | 1.70 | 1.44 | n/a | No Hit |
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