rs2099618 chr12:92172861 C>T
- Sequence
ccactggactaccccggaggctta[C/T]gtgccctgatgtgtctatgggctt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 0.98 | 0.35 | 1.07 |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, ldl cholesterol change with statins, maternal transmission distortion, transmission distortion