rs2101531 chr12:124131460 T>A
- Sequence
aggaaatgacaacagtgaaagaaa[T/A]cagacctaaccgactccatctcgc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ZN687_HUMAN MTA2_HUMAN ZN592_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN687_HUMAN | -1.72 | 1.72 | 1.00 | n/a | n/a | |||
| MTA2_HUMAN | -2.85 | 2.92 | 1.00 | n/a | n/a | |||
| ZN592_HUMAN | -1.46 | 1.46 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Esophagus_Muscularis, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg