rs2102290 chr8:100907616 G>C
- Sequence
ggcactgggcaacgtggtggcacc[G/C]agaagcttggagacaacaggaact
- ASB in cell types
- primary B-CLL cells TMD8 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- BRD4_HUMAN ITF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 3.30 | n/a | 2.00 | n/a | n/a | |||
| ITF2_HUMAN | 2.97 | -0.07 | 1.75 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP body mass index (bmi), cystatin c in serum, microalbuminuria, urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Cerebellum, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Thyroid, Whole_Blood