rs2102656 chr4:155954095 C>A

Sequence
aagagtcaggcacttgaccatgtg[C/A]tttcgaggtttcacttccatccat
ASB in cell types
monocyte-derived macrophages from peripheral blood
ASB for transcription factors
IKZF2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 2.19 -0.64 5.7·10-31.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hypertension (early onset hypertension),  parkinsons disease,  systolic blood pressure (sbp)
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Brain_Caudate_basal_ganglia,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Lung,  Nerve_Tibial,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Stomach,  Testis,  Thyroid

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