rs2106002 chr14:106418178 A>C

Sequence
attactgttatctccctcaccaac[A/C]cttgccatgaatcctgctggacca
ASB in cell types
MS-1 (Small cell lung carcinoma) LNCaP C4-2B (prostate carcinoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 2.76 0.01 6.5·10-41.00 1.82 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Colon_Transverse,  Esophagus_Mucosa,  Lung,  Spleen,  Stomach,  Testis,  Whole_Blood

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