rs2107706 chr7:106065356 C>G
- Sequence
cactgacctgccctctggttctgc[C/G]ctgacctgcccttgccaagcccac
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF10A (breast epithelial cells)
- ASB for transcription factors
- ESR1_HUMAN P63_HUMAN SMRC1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.67 | 0.03 | 1.77 | -4.62 | Concordant | |||
| P63_HUMAN | 1.20 | -0.08 | 1.69 | -1.00 | Weak Concordant | |||
| SMRC1_HUMAN | 1.14 | 1.76 | 1.00 | n/a | n/a |
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Motif analysis
