rs2108437 chr17:70071117 T>C

Sequence
tgaaatcaattatctttgatgcaa[T/C]tactcttcccctggaaagcatttt
ASB in cell types
iPSC (induced pluripotent stem cells)
ASB for transcription factors
DUX4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
DUX4_HUMAN 2.46 -2.49 0.021.00 1.00 -3.37 Concordant
Items per page:
1 – 1 of 1

Motif analysis

DUX4_HUMAN Concordant
DUX4_HUMAN pic

Genetic associations

GRASP bipolar disorder,  fasting insulin,  height,  homa-ir,  ldl cholesterol
GTEx eQTL Nerve_Tibial,  Pancreas,  Thyroid

Download