rs2108669 chr7:10875302 A>T
- Sequence
tgtccagtttccaggaacgccatg[A/T]tctagatgatagagccaggccagc
- ASB in cell types
- 22RV1 (prostate carcinoma) CWR22 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 0.27 | 3.12 | 2.06 | 5.64 | Concordant | |||
| FOXA1_HUMAN | -0.15 | 2.10 | 2.10 | n/a | No Hit |
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Motif analysis
