rs2108670 chr7:10875259 C>T

Sequence
tttacactcagcaggcaaacatgg[C/T]aacctagctgccagtgtctgtcca
ASB in cell types
22RV1 (prostate carcinoma) CWR22 (prostate carcinoma) prostate cancer
ASB for transcription factors
ANDR_HUMAN HXB13_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN -0.52 2.21 1.001.8·10-3 1.93 n/a No Hit
HXB13_HUMAN n/a 2.76 1.000.02 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol,  total cholesterol
GTEx eQTL Heart_Atrial_Appendage,  Heart_Left_Ventricle

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