rs2109517 chr7:116577603 G>A
- Sequence
gtgaaatcccaggcaacagcatgc[G/A]cgaaacggccactcaaagcagatg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ARNT_HUMAN IKZF2_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ARNT_HUMAN | -2.98 | 3.29 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | -0.03 | 1.46 | 1.00 | n/a | n/a | |||
| STAG1_HUMAN | 0.38 | 1.52 | 1.00 | n/a | n/a |
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