rs2110581 chr19:46353103 G>A
- Sequence
atcaagcctggctctgcaggtgca[G/A]acagggcatttgaccttgagcaag
- ASB in cell types
- TMD8 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- ITF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ITF2_HUMAN | 0.12 | 2.99 | 2.00 | -0.18 | Weak Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Colon_Sigmoid, Esophagus_Mucosa, Heart_Left_Ventricle, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Whole_Blood