rs2111077 chr2:8023457 A>G
- Sequence
tgtgtccaaggggctggcacacgg[A/G]agagtgagccacaaggcaggaagt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) macrophages form periferal blood SEM (childhood B acute lymphoblastic leukemia) monocytes from periferal blood
- ASB for transcription factors
- IKZF2_HUMAN IKZF1_HUMAN ELF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | -1.48 | 1.63 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | -0.77 | 1.30 | 1.20 | n/a | n/a | |||
| ELF1_HUMAN | 2.28 | 0.44 | 1.17 | -5.31 | Concordant |
Items per page:
1 – 3 of 3
Motif analysis
