rs2111902 chr12:108884971 T>G

Sequence
atgatggagatgatggtgatgatg[T/G]tgtgcctcaacccttccttcccac
ASB in cell types
CD14+ monocytes macrophages
ASB for transcription factors
CTCF_HUMAN STAT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN -0.22 1.42 1.000.02 1.24 n/a No Hit
STAT1_HUMAN 1.91 -0.16 0.041.00 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI exploratory eye movement dysfunction in schizophrenia (mean eye scanning length)
GRASP arthritis including non-rheumatoid,  longstanding arthritis,  neuroblastoma (brain cancer),  partial epilepsy,  rheumatoid arthritis,  sporadic creutzfeldt-jakob disease

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