rs2111992 chr7:134358346 A>G

Sequence
gtcactgtgggatcaaatgagatc[A/G]ggtggggatggctcccagtgcagc
ASB in cell types
ID00014 (lymphoblastoid cell, DiGeorge syndrome)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.36 0.70 1.000.04 1.39 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP homa-b,  homa-ir
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Whole_Blood

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