rs2112161 chr5:73624062 G>A

Sequence
atctggagcagtgaaatcaatcag[G/A]tgcaaagggttatttacacaactg
ASB in cell types
liver
ASB for transcription factors
HNF4A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HNF4A_HUMAN 2.05 -4.05 5.1·10-31.00 1.75 -2.53 Concordant
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Motif analysis

HNF4A_HUMAN Concordant
HNF4A_HUMAN pic

Genetic associations

GTEx eQTL Artery_Tibial,  Esophagus_Mucosa,  Liver,  Pancreas,  Skin_Sun_Exposed_Lower_leg

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