rs2112650 chr19:38684029 C>A
- Sequence
gggcctaacagagcaaacacaaga[C/A]gtggaaagcagacttggtgaggct
- ASB in cell types
- 22RV1 (prostate carcinoma) CTV-1 (Adult T acute lymphoblastic leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| 22RV1 (prostate carcinoma) | 2.47 | -1.50 | 2.00 | |||
| CTV-1 (Adult T acute lymphoblastic leukemia) | 0.40 | 0.88 | 1.00 |
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Motif analysis
No data available
Genetic associations
GRASP age at death with kuru exposure, fasting blood glucose, irritible bowel syndrome, primary rhegmatogenous retinal detachment
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Artery_Tibial, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Muscle_Skeletal, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Whole_Blood