rs2113583 chr7:155581457 A>G

Sequence
acctgcagagccctacatcctgat[A/G]caacctgtgggtgggaagaggcca
ASB in cell types
ER+ breast tumor MCF10A (breast epithelial cells)
ASB for transcription factors
ESR1_HUMAN TEAD4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 0.27 1.54 1.002.1·10-3 2.28 n/a No Hit
TEAD4_HUMAN -2.71 2.93 1.000.01 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol,  years of education

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