rs211411 chr10:32106064 T>C
- Sequence
tactttacaaagcgttttcatgta[T/C]atatctctttcaacattcacaatt
- ASB in cell types
- HepG2 (hepatoblastoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN FOXA2_HUMAN CEBPA_HUMAN SP130_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.58 | 1.96 | 1.43 | 2.16 | Concordant | |||
| FOXA2_HUMAN | -1.87 | 0.97 | 1.42 | n/a | No Hit | |||
| CEBPA_HUMAN | 0.19 | 1.79 | 1.50 | n/a | No Hit | |||
| SP130_HUMAN | -1.95 | 2.39 | 1.00 | n/a | n/a |
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Motif analysis
