rs2116666 chr7:38682090 G>A

Sequence
catcacatatctagatggattgga[G/A]ccagatgagaagcatatggtcctt
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.33 -0.10 5.0·10-91.00 1.49 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence,  paresthesia in response to topiramate treatment in healthy volunteers,  total cholesterol,  triglycerides,  years of education
GTEx eQTL Cells_Cultured_fibroblasts,  Ovary,  Stomach

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