rs2118079 chr3:87014721 C>T
- Sequence
aacctctgacctctctgtgcagat[C/T]caaactttttattttgatcatgcc
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.69 | 1.22 | 1.58 | -0.19 | Weak Discordant |
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Motif analysis
Genetic associations
GRASP aortic root diameter, childhood acute lymphoblastic leukemia, cystatin c in serum, systolic blood pressure (sbp)