rs2118305 chr2:65378086 A>C

Sequence
atccagtaaacatcagctgagcca[A/C]attccattgacacctcttttcaga
ASB in cell types
CFPAC-1(pancreatic ductal adenocarcinoma)
ASB for transcription factors
FOXA2_HUMAN FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA2_HUMAN -0.10 1.19 1.002.6·10-3 1.95 n/a No Hit
FOXA1_HUMAN 0.17 1.16 1.006.9·10-3 1.79 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  body mass index (bmi),  height,  rheumatoid arthritis,  years of education
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Adrenal_Gland,  Artery_Tibial,  Colon_Sigmoid,  Nerve_Tibial,  Ovary,  Prostate,  Testis,  Thyroid

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