rs2119017 chr2:42832092 C>T
- Sequence
tacggctggagctgagctttcgct[C/T]gccgtccaccactgctgtttgccg
- ASB in cell types
- WA01 (H1, human embryonic stem cells)
- ASB for transcription factors
- BHE40_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BHE40_HUMAN | -2.66 | 2.57 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Hippocampus, Brain_Nucleus_accumbens_basal_ganglia, Colon_Transverse, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Small_Intestine_Terminal_Ileum