rs2119018 chr2:42832146 C>A

Sequence
gcagacccgccgctgacttccatc[C/A]ctccagacacagggtgtccgctgt
ASB in cell types
WA01 (H1, human embryonic stem cells)
ASB for transcription factors
BHE40_HUMAN BRD4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BHE40_HUMAN n/a 3.69 1.001.2·10-6 1.00 n/a No Hit
BRD4_HUMAN 1.66 -0.87 0.041.00 1.00 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration,  systolic blood pressure (sbp),  triglycerides
GTEx eQTL Adipose_Subcutaneous,  Brain_Hippocampus,  Brain_Nucleus_accumbens_basal_ganglia,  Colon_Transverse,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Small_Intestine_Terminal_Ileum

Download