rs2119571 chr15:71386503 A>G
- Sequence
tgggaacctcagagaaaagggaaa[A/G]ggggcatatattttcaataaaata
- ASB in cell types
- neural cell GM19240 (B cells Lymphoblastoid Cell Lines) neural progenitors foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.55 | 1.41 | 1.23 | n/a | No Hit | |||
| SMC3_HUMAN | -1.96 | 2.36 | 1.00 | n/a | n/a | |||
| RAD21_HUMAN | 0.14 | 1.99 | 1.21 | n/a | n/a |
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