rs2119943 chr15:99486429 T>C
- Sequence
cagcagacacgcagcccacgtctc[T/C]gagggctggctgcgtgagtgaact
- ASB in cell types
- SYO-1(Biphasic synovial sarcoma) T47D (invasive ductal carcinoma)
- ASB for transcription factors
- SSXT_HUMAN HIF1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SSXT_HUMAN | -0.02 | 2.76 | 1.00 | n/a | n/a | |||
| HIF1A_HUMAN | 1.70 | n/a | 2.00 | n/a | No Hit |
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