rs2120334 chr2:68388953 C>T
- Sequence
agtcattccagtctgtgcttaggg[C/T]atgacaagaccaaaacctgggcat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MDM(monocyte derived macrophages)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 0.58 | 0.83 | 1.08 | |||
| MDM(monocyte derived macrophages) | -1.66 | 2.23 | 2.00 |
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