rs2121306 chr2:80167554 T>C
- Sequence
ttgagagagtaaatacagtgaaaa[T/C]atggaatttgtttccctcataact
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | n/a | 3.44 | 2.00 | 1.16 | Weak Concordant |
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Motif analysis
