rs2122005 chr15:28021881 G>A
- Sequence
ggtctggcagacagctggcagggc[G/A]cccggtaattctgagtgtctagtg
- ASB in cell types
- J-Lat A72 pancreas right lobe of liver GSC23 (Glioblastoma)
- ASB for transcription factors
- CTCF_HUMAN SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.56 | 0.23 | 1.36 | n/a | No Hit | |||
| SMCA4_HUMAN | 2.08 | -0.81 | 1.00 | n/a | n/a |
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