rs212532 chr1:21262110 C>G
- Sequence
gcatcgagccccggtcttgctgac[C/G]tcagggtgatggccctgaaagggg
- ASB in cell types
- K562 (myelogenous leukemia) CD14+ monocytes
- ASB for transcription factors
- ZN316_HUMAN E2F1_HUMAN ATF2_HUMAN ATF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN316_HUMAN | -0.41 | 3.75 | 1.00 | -4.14 | Discordant | |||
| E2F1_HUMAN | -2.85 | 3.24 | 1.00 | n/a | No Hit | |||
| ATF2_HUMAN | -2.75 | 3.11 | 1.00 | 4.66 | Concordant | |||
| ATF1_HUMAN | -2.77 | 3.17 | 1.00 | 3.97 | Concordant | |||
| ATF3_HUMAN | -1.27 | 1.03 | 1.17 | 4.63 | Concordant |
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Motif analysis
