rs2125488 chr4:55173775 C>T

Sequence
taacagcaaagttgtataactcac[C/T]cctctatttgctagctgtgtgatt
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells) HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
TF65_HUMAN TCF21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN -1.15 2.00 1.009.4·10-3 2.00 n/a No Hit
TCF21_HUMAN n/a 1.56 1.009.5·10-3 2.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP fasting blood glucose,  homa-b,  ldl cholesterol change with statins
GTEx eQTL Cells_Cultured_fibroblasts,  Skin_Sun_Exposed_Lower_leg

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