rs2127546 chr12:67595581 C>T
- Sequence
agcgatatggtatactggtatgta[C/T]ggcgtgaagaaaagagctagggtt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7 WS8 cells MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant) T47D (invasive ductal carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN GRHL2_HUMAN PKNX1_HUMAN RFX5_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.65 | -0.05 | 1.87 | n/a | No Hit | |||
| GRHL2_HUMAN | 1.14 | 0.33 | 2.00 | n/a | No Hit | |||
| PKNX1_HUMAN | 2.46 | -2.18 | 1.00 | n/a | No Hit | |||
| RFX5_HUMAN | 2.38 | n/a | 1.00 | n/a | No Hit |
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