rs2128699 chr1:21647715 C>T
- Sequence
actcaagtccacacctgccatgct[C/T]tttcccctaccccaggaacattca
- ASB in cell types
- K562 (myelogenous leukemia) CRC107 (colorectal cancer metastatic stem cells) TMD8 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- ITF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ITF2_HUMAN | -2.00 | 2.94 | 2.00 | -0.36 | Weak Discordant |
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Motif analysis
