rs2130728 chr5:172178467 T>C
- Sequence
aactctcatctcaggcagcacctt[T/C]cggtctcctcccccatgacacact
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTBP1_HUMAN ZN407_HUMAN ARI1B_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTBP1_HUMAN | n/a | 4.01 | 2.00 | n/a | n/a | |||
| ZN407_HUMAN | n/a | 3.46 | 2.00 | n/a | No Hit | |||
| ARI1B_HUMAN | n/a | 2.36 | 2.00 | n/a | n/a | |||
| IKZF1_HUMAN | -0.44 | 2.32 | 1.50 | n/a | n/a | |||
| RING2_HUMAN | n/a | 3.40 | 2.00 | n/a | n/a |
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