rs2131678 chr1:8883777 G>A
- Sequence
catggcctccctcagggccccagc[G/A]cctttatctttgggatggatgtga
- ASB in cell types
- WA09 (embryonic stem cells)
- ASB for transcription factors
- NANOG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NANOG_HUMAN | 2.36 | -2.81 | 1.50 | -0.90 | Weak Concordant |
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Motif analysis
